BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014E11LP1|AL426702
(837 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1543 1584 0.0
>3x_Contig1543
Length = 9648
Score = 1584 bits (794), Expect = 0.0
Identities = 822/837 (98%)
Strand = Plus / Minus
Query: 1 gatctnatgcctcacctcgtcactctacatctgcaaccagatcaaacgaccgtgaattta 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5423 gatcttatgcctcacctcgtcactctacatctgcaaccagatcaaacgaccgtgaattta 5364
Query: 61 atttcgaacggtccggagctgatgacgaaatagatctcaatgagacaattaggccagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5363 atttcgaacggtccggagctgatgacgaaatagatctcaatgagacaattaggccagaaa 5304
Query: 121 ttgataatccyaagggagtacaacgcaatggcaacggtgatgatgatgatttaaacaatt 180
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5303 ttgataatcctaagggagttcaacgcaatggcaacggtgatgatgatgatttaaacaatt 5244
Query: 181 ccattcatgagaacgagggtattgggaccccygcmaagggttatcagacatttgaagata 240
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 5243 ccattcatgagaacgagggtattgggacccctgcaaagggttatcagacatttgaagata 5184
Query: 241 ttcaaaaagaaagtcagcgtgctgaacaacaagaagaagatgaagaagtagatgggatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5183 ttcaaaaagaaagtcagcgtgctgaacaacaagaagaagatgaagaagtagatgggatca 5124
Query: 301 agcaacagatcaaatttacaaaacagagttcagttgccagtacgagaaacacgccaaaga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5123 agcaacagatcaaatttacaaaacagagttcagttgccagtacgagaaacacgctaaaga 5064
Query: 361 tggcacaggatgcygaattagctggtatgaataccatcggtatgttaggacatcaatcgg 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5063 tggcacaggatgctgaattagctggtatgaataccatcggtatgttaggacatcaatcgg 5004
Query: 421 agaaattgaacaatgtggaaagaaaccygaatttaatgcmaatccagaacagagttgccg 480
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 5003 agaaattgaacaatgtggaaagaaacctgaatttaatgcaaatccagaacagagttgccg 4944
Query: 481 atgataaagtgagtgaattgaagaagttaaaccggaacattttagcggtccatgtatcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4943 atgataaagtgagtgaattgaagaagttaaaccggaacattttagcggtccatgtatcga 4884
Query: 541 atccgttccatagtaagagacgtgcacgcgaacgagaagataagataaagttacaaagga 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4883 atccgttccatagtaagagacgtgcacgcgaagcggaagataagataaagttacaaagga 4824
Query: 601 tgcaggacaaacaaaaccaagaggatatcacgtcgacgttacaccaaagtacgaaacgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4823 tgcaggacaaacaaaaccaagaggatatcacgtcgacgttacaccaaagtacgaaacgta 4764
Query: 661 tcgagaatgccatgtcgagtggacatggtccatctgaagttcgtgatctgtaccagaacc 720
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4763 tcgagaatgccatgtcgagtggacatggtccatctgaagttcgtgatcggtaccagaacc 4704
Query: 721 agcagatcttagagaaggctaaaaggtatcagttcgagaacgacgwagaagatgatgaaa 780
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4703 agcagatcttagagaaggctaaaaggtatcagttcgagaacgacgaagaagatgatgaaa 4644
Query: 781 tggwaatggaaatcgacaagaacttggataagattggacaaatcagtggtaggttaa 837
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4643 tggaaatggaaatcgacaagaacttggataagattggacaaatcagtggtaggttaa 4587
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7047
Number of Sequences: 1807
Number of extensions: 7047
Number of successful extensions: 88
Number of sequences better than 1.0e-20: 1
length of query: 837
length of database: 10,358,551
effective HSP length: 16
effective length of query: 821
effective length of database: 10,329,639
effective search space: 8480633619
effective search space used: 8480633619
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)